This repository contains the basic scripts and configurations necessary to run a sex chromosome identification investigation as outlined in SexFindR: A computational workflow to identify you and old sex chromsomes (https://www.biorxiv.org/content/10.1101/2022.02.21.481346v1) alongside a detailed Read the Docs (https://sexfindr.readthedocs.io/en/latest/).
The folder structure in this repo mirrors the page structure in the Read the Docs to allow for ease of use.