CamachoDejay / czi_spec_im_load

Loading and handling of spectral imaging data from CZI format using bioformats

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CZI spectral imaging: loading into MATLAB

Loading and handling of spectral imaging data from CZI format using bioformats.

Project developed for user support at the Centre for Cellular Imaging of Gothenburg university.

What is in the project

main script to load and manipulate .CZI images adquired in the LSM780. Particular focus in handling data sets with spectral imaging and z stacks

How do I get set up

You must install bioformats. Please follow instructions in the link and make sure bioformats is added to your MATLAB path. If this is not done properly the instruction on line 10 of main "bfopen" will not work.

About

Loading and handling of spectral imaging data from CZI format using bioformats

License:GNU General Public License v3.0


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Language:MATLAB 100.0%