CYing18

PANTHER

Morphological Prototyping for Unsupervised Slide Representation Learning in Computational Pathology - CVPR 2024

CONCH

A vision-language foundation model for computational pathology - Nature Medicine

LLaVA

[NeurIPS'23 Oral] Visual Instruction Tuning (LLaVA) built towards GPT-4V level capabilities and beyond.

prov-gigapath

Prov-GigaPath: A whole-slide foundation model for digital pathology from real-world data

pathology_mllm_training

ViLa-MIL

ViLa-MIL: Dual-scale Vision-Language Multiple Instance Learning for Whole Slide Image Classification (CVPR 2024)

xtuner

An efficient, flexible and full-featured toolkit for fine-tuning LLM (InternLM2, Llama3, Phi3, Qwen, Mistral, ...)

HiddenMambaAttn

Official PyTorch Implementation of "The Hidden Attention of Mamba Models"

awesome-medical-image-papers

UNI

Towards a general-purpose foundation model for computational pathology - Nature Medicine

MOTCat

SurvPath

Modeling Dense Multimodal Interactions Between Biological Pathways and Histology for Survival Prediction - CVPR 2024

PathoDuet

MHIM-MIL

[ICCV 2023 Oral] Multiple Instance Learning Framework with Masked Hard Instance Mining for Whole Slide Image Classification

AttentionDeepMIL

Implementation of Attention-based Deep Multiple Instance Learning in PyTorch

TransMIL

TransMIL: Transformer based Correlated Multiple Instance Learning for Whole Slide Image Classification

Vim

[ICML 2024] Vision Mamba: Efficient Visual Representation Learning with Bidirectional State Space Model

mamba

Mamba SSM architecture

Efficient-Prompt

Awesome-Foundation-Models-in-Medical-Imaging

A curated list of foundation models for vision and language tasks in medical imaging

multimodal-prompt-learning

[CVPR 2023] Official repository of paper titled "MaPLe: Multi-modal Prompt Learning".

dsmil-wsi

DSMIL: Dual-stream multiple instance learning networks for tumor detection in Whole Slide Image

sipser-computation-3rd-solutions

Solutions to all questions of the book Introduction to the Theory of Computation, 3rd edition by Michael Sipser

Survival-XSurv

[MICCAI2023] XSurv: Merging-Diverging Hybrid Transformer Networks for Survival Prediction

Patch-GCN

Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks - MICCAI 2021

GC-SPLeM

Survival Prediction for Gastric Cancer via Multimodal Learning of Whole Slide Images and Gene Expression -- BIBM 2022

CAMR

KFC

KFC: Kinship Verification with Fair Contrastive loss and Multi-Task Learning

MLA-GNN

SupContrast

PyTorch implementation of "Supervised Contrastive Learning" (and SimCLR incidentally)