Bioinformatics-IBB / Modeller-Ubuntu

This is a repository of Modeller automation(Linux version), which will help us to develop exclusive codes for Bioinformatics. We are curious Computer Science people, who are exploring Bioinformatics, This project is also a part of that voyage.

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Welcome to the Project's wiki!

Here we are implementing Automation, clustering of codes, redefining functions of Modeller™(Salilab's) for Ubuntu.😊


A project for our own understanding of Modeller™ as well as bioinformatics.

The scope of project is to Develop and maintain GST, CYP4, CYP6 based automation tools, So that it will be helpful in further different projects related to our core thesis. Hence following are the checkpoints based on their timeline:-

  • Establishment of Environment.
  • Development of Automation scripts.
  • Alteration of predefined codes as per our project.
  • Providing User-friendliness.
  • Development of GUI tool.
  • Generate Ramchandran Plot and Dope score.

whole tool is based on Python🐍 and Modeller™ scripts. Which includes PIR, FASTA, ALI files. Which have Genomic data. Modeller™ provides processing libraries.


Requirments

**Follwing are the requirments of this project:- **

  • Python2.7
  • wget for Python

To install requirments run the following command:-

pip install -r requirements.txt


Install

To install this project you can drectly download this repo or you can use git clone, Here we go:-

[1] From Download Button: Click on the Clone or download and the Download Zip . By this downloads should be started.

[2] From commands: git clone https://github.com/Bioinformatics-IBB/Modeller/ . By this downloads should be started.


License

Bioinformatics-IBB/Modeller is licensed under the GNU General Public License v3.0 Permissions of this strong copyleft license are conditioned on making available complete source code of licensed works and modifications, which include larger works using a licensed work, under the same license. Copyright and license notices must be preserved. Contributors provide an express grant of patent rights. License

Made with ❤ by Priyank Namdev, Shivam Namdev, Neha Kane

About

This is a repository of Modeller automation(Linux version), which will help us to develop exclusive codes for Bioinformatics. We are curious Computer Science people, who are exploring Bioinformatics, This project is also a part of that voyage.

License:GNU General Public License v3.0


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