Beast code in Giters

BenoitMorel's repositories

GeneRax

Language:C++AGPL-3.061 9 75

ParGenes

A massively parallel tool for model selection and tree inference on thousands of genes

Language:PythonGPL-3.039 4 74

AleRax

Gene tree - species tree reconciliation from gene tree distributions

Language:C++14 4 7

Asteroid

Language:C++AGPL-3.09 3 11

covid19_cme_analysis

Language:C++AGPL-3.07 10 4

phd_experiments

Language:Python4 2 1

RepeatsCounter

Language:C++2 2 1

GeneRaxWorkshop

Language:Python1 10

GiTraTra

Github traffic tracker

Language:Python1 20

sandbox

Language:C++1 20

SpeciesRaxEmpiricalTrees

Language:Python100

ASTRAL

Accurate Species TRee ALgorithm

Language:JavaApache-2.0010

BenoitDatasets

Language:Shell020

bioconda-recipes

Conda recipes for the bioconda channel.

Language:ShellMIT010

covid_pipeline_light

000

DTLTools

AGPL-3.0000

ecceTERA

Language:C++NOASSERTION010

GeneRaxCore

Code used in both GeneRax and AleRax

Language:C++000

GiRaF

Language:C++AGPL-3.0020

marching-cubes

Language:C++020

modeltest

Best-fit model selection

Language:C++GPL-3.0020

MPIScheduler

Language:C++02 1

ParGeneBayes

Language:ShellGPL-3.0000

PHYLDOG

Software for estimating species tree and gene trees in the presence of duplications and losses

Language:C++NOASSERTION020

ranger

A Fast Implementation of Random Forests

Language:C++010

raxml-ng

RAxML Next Generation: faster, easier-to-use and more flexible

Language:C++AGPL-3.0020

RayTracer

Language:C++000

ReconciliationSandbox

Language:Python020

STRIDE

STRIDE: Species Tree Root Inference from Gene Duplication Events

Language:PythonNOASSERTION010

tree-compression

Language:C++000