BIMSBbioinfo / scmaui-experiments

Tutorials for scMaui

scMaui Tutorials

This repository provides tutorials about how to use scMaui for various types of single-cell multiomics data. scMaui (Single-cell Multiomics Autoencoder Integration) is a new single-cell multiomics integration method based on variational product-of-experts autoencoders and adversarial learning.

Contents

• Before running scMaui
  • Data preprocessing
• Running scMaui
  • RNA+ATAC
  • RNA+Protein
  • RNA+Methylation
• After running scMaui
  • UMAP/Clustering/Marker gene/Trajectory
  • Latent analysis

Citation

scMaui manuscript is available on bioRxiv.

The figure was created using BioRender