The nHuSC R package and associated R shiny app was modified from the nMyo package written by Efthymios Motakis & Diana Low.
nHuSC was developed to visualise the single-cell RNA-seq expression profiles of 78,264 human cardiac cells from the left ventricle. The detailed vignette is available in this repository.
The R shiny applet enables the user to select a gene ID or symbol, and it generates a series of interactive plots (UMAP and Violin Plot) for data visualisation and exploratory analysis.
The package can be installed on R after downloading the tar.gz file using the command:
install.packages("pathdirectory/nHuSC.1.0.tar.gz", repos = NULL, type = "source")To run the R shiny app after installation:
library(nHuSC)
run_nHuSC()