AlexanderPico / cyrface

Bridging Cytoscape with R

Cyrface - Bridging Cytoscape with R

Cyrface establishes an interface between R and Cytoscape by using different Java-R libraries, e.g. Rserve, RCaller. Cyrface can be used as a Cytoscape plug-in, e.g. to run R commands within Cytoscape, or used as a library to allow your plug-in to connect to R.

https://saezlab.github.io/cyrface/

Reference

Gonçalves, E., Saez-Rodriguez, J., 2013. Cyrface: An interface from Cytoscape to R that provides a user interface to R packages. F1000Res. 2.