Adam C Smith's repositories
Estimating_Change_in_NorthAmerican_Birds
Estimating the change in number of birds in the North American avifauna 1970-2017. Rosenberg et al. 2019
CWS_BBS_2021_Analyses
Documentation of the methods used to analyse the BBS for the 2021 data-release
BBS_eBird_compare
sandbox fo comparing trends between BBS and eBird
Route-level_BBS_trends
repo for development of spatially explicit BBS route trend models
CWS_2022_BBS_Analyses
Full workflow to recreate the 2022 BBS analyses
Spatial_Hierarchical_Trend_Models
Spatially explicit models for long-term monitoring data of birds in North America
AdamCSmithCWS.github.io
My website
Bird_generation_times
reconciling generation times and taxonomic names
birdtrends
This package provides a flexible framework to generate trends (historic or projected), based on actual or modeled annual indices data.
CONW_trends
Estimating population trends for Connecticut Warbler
Genetic_rescue_meta
meta analysis of the genetic rescue on heterozygosity and fitness
HRE_testing
testing of a parallel application of BBS analyses in linux vm
Jefferys_etal
covariates on trends for Rufous Hummingbird
monitoring_coverage
Estimating the annual population coverage of long-term monitoring programs
multispecies-qpad-detectability
Estimating detectability of North American landbirds by accounting for phylogenetics and traits in a Bayesian multi-species model
nest_survival_repo
Directed studies course: bayesian stats: nest survival project
phylo_func_trends
Using phylogenetic and functional relationships to inform nonlinear trend estimates from long-term biodiversity data
Route_level_BBS_data
simple script to extract route-level BBS data with appropriate zeros
State_of_Canadas_Birds
Summary analyses for composite species indicators
SurveyCoverage
Simple Package to calculate species range coverage of monitoring programs
test
temp_todelete