ABCD-STUDY

ABCD Data Analytics and Informatics Resource Center's repositories

analysis-nda

Collection of scripts to analyze ABCD release data

Language:R42 31 14

nda-abcd-collection-3165

This is the documentation repository for ongoing releases to the NDA collection 3165. Please add GitHub Issues here for requests or feedback.

BSD-3-Clause16 12 60

For selectively downloading ABCD data QC'ed as good by the DAIC, converting it to BIDS standard input data, selecting the best pair of spin echo field maps, and correcting the sidecar JSON files to meet BIDS Validator spec.

Language:PythonBSD-3-Clause9 5 12

abcd_acs_raked_propensity

How to calculate raked propensity scores for the ABCD Study cohort

Language:R9 30

nda-abcd-s3-downloader

Tool for downloading ABCD_BIDS inputs and derivatives from the ABCD-BIDS NDA Collection 3165.

Language:PythonBSD-3-Clause8 3 3

FIONASITE

Data upload site for FIONA site computer

Language:JavaScript6 190

abcd-hcp-pipeline

bids application for processing functional MRI data, robust to scanner, acquisition and age variability.

Language:PythonBSD-3-Clause5 50

abcd_extract_eprime

scripts that extract task timing and behavioral metrics

Language:MATLAB5 3 1

redcap-to-nda

Exporting REDCap data dictionaries and data to the NIMH National Data Archive (NDA)

Language:JavaScript5 25 8

BPPCA_Neurocognition_Thompson_etal_2018

The Structure of Cognition in 9 and 10 year-old Children and Associations with Problem Behaviors: Findings from the ABCD Study’s Baseline Neurocognitive Battery.

Language:R4 20

fitbit-pipeline

Contains processing, direct alert generation, and scoring logic for ABCD Fitbit data

Language:Python4 30

geocoding

A framework for adding gelocation derived data to the ABCD study.

Language:RMIT4 22 1

gfa_ses

GFA for SES measures

Language:R4 20

ABCDWorkshop-reproducible-science

Material collection for the ABCD-DAIC workshops on data science

Language:JavaScriptNOASSERTION3 20

auto-scoring

Visual programming to calculate derived scores for REDCap

Language:JavaScript3 20

fMRI-cleanup

Language:R3 20

Minimally-Processed-Image-Sharing

Language:Python3 20

abcd_docker

Dockerfile for creating the ABCD docker image

Language:Shell2 20

MeaningfulAssociations_Dick_etal_2021

This repository contains the statistic scripts (.R) for running the worked examples in the paper "Meaningful Associations in the Adolescent Brain Cognitive Development Study"

Language:R200

redcap_rewrite_history

Change the name of REDCap items in an existing project and attempt to rewrite the projects history.

Language:PHPGPL-3.02 3 1

abcd-dev

A basic ABCD development environment running ubuntu, apache2 and php7

1 200

complete_row

REDCap extension module: Colors each row of an instrument - if a value has been provided. This will highlight rows with missing values to improve their visibility.

Language:PHPGPL-3.01 2 1