zzsnow's repositories
alphafold
Open source code for AlphaFold.
awesome-jupyter
A curated list of awesome Jupyter projects, libraries and resources
cheatsheets
RStudio Cheat Sheets
dia-pasef
Scripts for DIA-Pasef
DiaNN
DIA-NN - a fast and easy to use tool for processing data-independent acquisition (DIA) proteomics data
DL-SR
Tensorflow/keras implementation for image transformation from low-resolution (LR) image to super-resolved one, including single wide-field (WF) image super-resolution prediction and SIM reconstruction.
FucciSingleCellSeqPipeline
Cell cycle analysis of single-cell proteomic and transcriptomic data for the FUCCI cell model -- RNA-Seq analysis pipeline
gallery
Gallery of ggplot2 extensions
GNPS_Workflows
Public Workflows at GNPS
joyful-pandas
Pandas中文教程
Learn-Statistical-Learning-Method
Implementation of Statistical Learning Method, Second Edition.《统计学习方法》第二版，算法实现。
Lihang
Statistical learning methods, 统计学习方法(第2版)[李航] [笔记, 代码, notebook, 参考文献, Errata, lihang]
msgfplus
MS-GF+ (aka MSGF+ or MSGFPlus) performs peptide identification by scoring MS/MS spectra against peptides derived from a protein sequence database.
NLP-Conferences-Code
NLP-Conferences-Code (ACL、EMNL、NAACL、COLING、AAAI、IJCAI)
nlp_course
YSDA course in Natural Language Processing
OpenMS
The codebase of the OpenMS project
or-pandas
【运筹OR帷幄|数据科学】pandas教程系列电子书
PaddleHelix
Bio-Computing Platform featuring Large-Scale Representation Learning and Multi-Task Deep Learning “螺旋桨”生物计算工具集
pgap
NCBI Prokaryotic Genome Annotation Pipeline
prosit
Prosit offers high quality MS2 predicted spectra for any organism and protease as well as iRT prediction. When using Prosit is helpful for your research, please cite "Gessulat, Schmidt et al. 2019" DOI 10.1038/s41592-019-0426-7
ProteinGraphML
Protein Graph in Python for MetaPath-ML and more.
Python-Knowledge-Handbook
Python Knowledge Handbook by Python数据之道， website： http://liyangbit.com/
SingleCellProteogenomics
Cell cycle analysis of single-cell proteomic and transcriptomic data for the FUCCI cell model
sirius-libs
sirius-libs - Metabolomics mass spectrometry framework for molecular formula identification of small molecules written in Java