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RNASkim

RNA-Skim: a rapid method for RNA-Seq quantification at transcript level

ALIGATOR2

PATHWAY ANALYSIS TOOL

Cufflinks

emacs-starter-kit

technomancy's kit via eschulte + add-ons for social sciences: LaTeX/ESS/R related. Requires you have git installed in order to pull down some submodules. See the project homepage and README for more.

GEX

Gene Expression Analysis Toolset

jeweler

Taking your cufflinks to a jeweler to be repaired is generally what most people do.

PEA

Pathway Enrichment Analysis

TopHat

kached

A cache library written in C++

lnd

Lightning Network Daemon ⚡️

pached

Python Cache Library

rached

A cache library written in R

sailfish

Rapid Alignment-free Isoform Quantification from RNA-Seq Reads

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