zqy396

tutorials

MONAI Tutorials

SBLNP

histocartography

A standardized Python API with necessary preprocessing, machine learning and explainability tools to facilitate graph-analytics in computational pathology.

CLAM

Data-efficient and weakly supervised computational pathology on whole slide images - Nature Biomedical Engineering

HistoClean

HistoClean is a tool for the preprocessing and augmentation of images used in deep learning models. This easy to use application brings together the most popular image processing packages from across the python universe, meaning no more looking at documentation! HistoClean provides real time feedback to augmentations and preprocessing options. This allows users to evaluate their steps before implementation.

pathology-whole-slide-data

A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.

Vahadane

Structure-Preserving Color Normalization and Sparse Stain Separation for Histological Images

ASAP

Program for the analysis and visualization of whole-slide images in digital pathology

SSL4MIS

Semi Supervised Learning for Medical Image Segmentation, a collection of literature reviews and code implementations.

cnn_desmoke

cnn_desmoke