Beast code in Giters

Huanwei Wang's starred repositories

Talk

The material for my talks

2600

smr

Language:C++100

qqman

An R package for creating Q-Q and manhattan plots from GWAS results

Language:HTMLGPL-3.015100

ldsc

LD Score Regression (LDSC)

Language:PythonGPL-3.061500

qsubshcom

qsub command for serveral cluster engine

Language:ShellMIT1200

labs

Rmd source files for the HarvardX series PH525x

Language:RMIT196900

alignment

Spliced alignment evaluation software

Language:PerlGPL-3.01300

450k-analysis-guide

A Practical (And Opinionated) Guide To Analyzing 450K Data

Language:TeX3400

datasharing

The Leek group guide to data sharing

650500

STAR

RNA-seq aligner

Language:CMIT178300

RNAseq

RNAseq data analysis pipeline

300

bamtools

C++ API & command-line toolkit for working with BAM data

Language:C++MIT41200

git_tutorial

One-hour online tutorial of git.

600

SequencingPipeline

Analytical framework of whole genome sequencing for genetic studies of human diseases

Language:Shell200

RSEM

RSEM: accurate quantification of gene and isoform expression from RNA-Seq data

Language:C++GPL-3.040400

courses

Course materials for the Data Science Specialization: https://www.coursera.org/specialization/jhudatascience/1

Language:HTML403100

MACS

MACS -- Model-based Analysis of ChIP-Seq

Language:CythonBSD-3-Clause69500

MISO

MISO: Mixture of Isoforms model for RNA-Seq isoform quantitation

Language:C13000

long-rna-seq-pipeline

STAR based ENCODE Long RNA-Seq processing pipeline

Language:PythonMIT9200

Genomic-analysis

300

statgen_equations

Language:HTMLMIT800

gaohaoyang.github.io

blog & blog theme🤘

Language:SCSSMIT187700