zihua's repositories
gbwt
Substring index for paths in a graph
ShuffleNet_V2_pytorch_caffe
ShuffleNet-V2 for both PyTorch and Caffe.
fast-neural-style
pytorch implementation of fast-neural-style
MMseqs2
MMseqs2: ultra fast and sensitive search and clustering suite
diamond
Accelerated BLAST compatible local sequence aligner.
seqan
SeqAn's official repository.
kallisto
Near-optimal RNA-Seq quantification
deepvariant
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
scallop
Scallop is a reference-based transcriptome assembler for RNA-seq
sdsl-lite
Succinct Data Structure Library 2.0
cdhit
Automatically exported from code.google.com/p/cdhit
edlib
Lightweight, super fast C/C++ (& Python) library for sequence alignment using edit (Levenshtein) distance.
triangle
Convert images to computer generated art using delaunay triangulation.
sthlmBeamerTheme
LaTeX Beamer slide deck theme based on HSRM: -> View pdf sample ->
gcsa2
BWT-based index for graphs
ryg_rans
Simple rANS encoder/decoder (arithmetic coding-ish entropy coder).
Catch
A modern, C++-native, header-only, test framework for unit-tests, TDD and BDD - using C++98, C++03, C++11, C++14 and later
irap
integrated RNA-seq Analysis Pipeline
FunctionalPlus
helps you write concise and readable C++ code.
casbin
An authorization library that supports access control models like ACL, RBAC, ABAC
upspin
Upspin: A framework for naming everyone's everything.
gogs
Gogs is a painless self-hosted Git service.
duplicacy
A new generation cloud backup tool
fsql
Search through your filesystem with SQL-esque queries.
PRMLT
Matlab code for algorithms in PRML book
giab_data_indexes
This repository contains data indexes from NIST's Genome in a Bottle project.
RcppArmadillo
Rcpp integration for Armadillo templated linear algebra library
lowlevelprogramming-university
How to be low-level programmer
awesome
:sunglasses: Curated list of awesome lists