Zhili's repositories
cromwell
Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments
hdf5Convert
A program to transfer in house hdf5 data
finemapping-pipeline
Statistical fine-mapping pipeline in FinnGen
gdriveupload
A command line utility for interacting with Google Drive and Team Drive
expTools
Docker tools for cloud, tools in R and Python
joint-calling
Sample and variant QC, based on https://github.com/broadinstitute/gnomad_qc
polyfun
PolyFun (POLYgenic FUNctionally-informed fine-mapping)
LDpred-funct
Here we develop the software for the method LDpredfunct described in https://www.biorxiv.org/content/early/2018/07/24/375337
pheweb
A tool to build multi-phenotype GWAS browsers
llvm-utils
LLVM/Clang for Visual Studio 2019, 2017, 2015, 2013, 2012 and 2010. Utils for Clang Static Analyzer
gruvbox
Retro groove color scheme for Vim
iswasmfast
Performance comparison of WebAssembly, C++ Addon, and native implementations of various algorithms in Node.js.
mrfDepth
:exclamation: This is a read-only mirror of the CRAN R package repository. mrfDepth — Depth Measures in Multivariate, Regression and Functional Settings. Homepage: https://github.com/PSegaert/mrfDepth Report bugs for this package: https://github.com/PSegaert/mrfDepth/issues
libpopcnt
🚀 Fast C/C++ bit population count library
hamming_weight
C library to compute the Hamming weight of arrays
cxxopts
Lightweight C++ command line option parser
open-in-buttons-for-finder-toolbar
Open in TextMate, open in VS Code buttons for Finder toolbar
jquery.tocify.js
A jQuery Table of Contents plugin that can be themed with Twitter Bootstrap or jQueryUI.
sisg_mcmc_course
Lecture notes for Eric Anderson and Matthew Stephens SISG course on MCMC for Statistical Genetics
gtest-cmake-example
A sample project using GoogleTest with CMake
impute-pipe
:shower: Canonical SGE cluster genotype imputation pipeline
mRnd
Power calculations for Mendelian Randomisation
cmake-modules
CMake module collection