zhen-fu's repositories
bioc_rna_seq
This is the repo for data and code for RNA-seq analysis
TrimGalore
A wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS data
GPL-3.0000
Soi_16S_seq
This is the analysis pipeline for 16S sequencing data
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WGBS_Biscuit_Snakemake
Snakemake Workflow For WGBS Data
GPL-3.0000
rnaseq_workflow
snakemake workflow for bulk RNA-seq workflow using STAR-edgeR
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R_grouped_bar_making
Simple R code to make plots
Language:R000
trinity_treat_control
The most simple case of running Trinity RNA-seq assembly and quantify gene expression of two conditions
Language:Shell000
Language:R000
teaching_demo
This is for the teaching demo of proposed course "Plant-insect-microbe interactions"
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