zhangyuqing

ComBat-seq

Batch effect adjustment based on negative binomial regression for RNA sequencing count data

sva-devel

Algorithm_Interview_Notes-Chinese

2018/2019/校招/春招/秋招/算法/机器学习(Machine Learning)/深度学习(Deep Learning)/自然语言处理(NLP)/C/C++/Python/面试笔记

simulatorZ

simulates collections of independent genomic data sets, and performs within- and across-study training and validation with predicting algorithms

h2o_purchasing_intention

bea_ensemble

meanonly_reference_combat

singleCellTK

Interactively Analyze scRNA-Seq Data

autonomous_driving

AI system for autonomous driving real-time detection

DSB2017_lung_cancer_CNN

mec-mini-projects

awesome-ai-residency

List of AI Residency Programs

bash-guide

A guide to learn bash

batch_prediction_pipeline

Simulation pipeline -- the impact of batch effect and adjustment on prediction model performances

BatchQC

Provides Quality Control of sequencing samples by deducing if there is batch effect and adjusts for it.

cheatsheets

RStudio Cheat Sheets

cocoapi

COCO API - Dataset @ http://cocodataset.org/

cs231n.github.io

Public facing notes page

dataset-heterogeneity

the influence of changing covariate prevalence on cross-study validation performance

deep-learning-coursera

Deep Learning Specialization by Andrew Ng on Coursera.

examples

A set of examples around pytorch in Vision, Text, Reinforcement Learning, etc.

mapggm_supplemental

Simulation pipeline and TCGA data/scripts for "Detection of multiple perturbations in multi-omics biological networks''

shap

A game theoretic approach to explain the output of any machine learning model.

snorkeling

Extracting biomedical relationships from literature with Snorkel 🏊

UGATIT

Official Tensorflow implementation of U-GAT-IT: Unsupervised Generative Attentional Networks with Adaptive Layer-Instance Normalization for Image-to-Image Translation (ICLR 2020)

UGATIT-pytorch

Official PyTorch implementation of U-GAT-IT: Unsupervised Generative Attentional Networks with Adaptive Layer-Instance Normalization for Image-to-Image Translation

zhangyuqing.github.io