zerland's repositories
apply_metaCCA
Exploring metaCCA method on UK Biobank data
aSPU
An R package for adaptive sum of powered score test(ASPU) in genetic association studies.
cardiometabolic_prs_plasma_proteome
Source code and software list for the study "Integrative analysis of the plasma proteome and polygenic risk of cardiometabolic diseases" on bioRxiv (doi: 10.1101/2019.12.14.876474)
FM-summary
Fine-mapping method only using summary statistics
gtex-v8
Notebooks and scripts for reproducing analyses and figures from the V8 GTEx Consortium paper
GWASDataAnalysis
Functions to extract data from GWAS studies and optimize analysis of the GWAS catalog.
JM-GWAS
GWAS pipeline: Vitamin-D in the UKB including SMR analysis
mister
Simulation study of various Mendelian Randomization approaches using summary data
MR-antihypertensives-AD
Repurposing antihypertensive drugs for the prevention of Alzheimer’s disease: a Mendelian Randomization study
MRCD
R package "MRCD", for inferring causal direction with correlation ratio methods.
PharmIV
Power calculator for instrumental variable analysis in pharmacoepidemiology
PhD_Code
All code written or collected during my PhD
sim-BWMR
Code for the experiments in BWMR
snpR
R-based tools to deal with SNP data and data from the GWAS catalog
swirl_courses
:mortar_board: A collection of interactive courses for the swirl R package.
Trans-Phar
GWAS-TWAS (Transcriptome-wide association study)-Pharmacological library integration pipeline
TWAS
Processing of TWAS Data