zengfengbo

learnR

Learn R as a programming language

lubridate

Make working with dates in R just that little bit easier

magrittr

R package to bring forward-piping features ala F#'s |> operator. Ceci n'est pas un pipe.

Jellyfish

A fast multi-threaded k-mer counter

leetcode

LeetCode 175 Problems' Solutions (up-to-date)

learnxinyminutes-docs

Code documentation written as code! How novel and totally my idea!

SeqPrep

Tool for stripping adaptors and/or merging paired reads with overlap into single reads.

clj-biosequence

A Clojure library designed to make the manipulation of biological sequence data easier.

biopython

Official git repository for Biopython (converted from CVS)

bwa

Burrow-Wheeler Aligner for pairwise alignment between DNA sequences

SwitchyOmega

Manage and switch between multiple proxies quickly & easily.

sra-tools

SRA Tools

oh-my-fish

Framework for managing your fish shell configuration inspired by Oh My ZSH.

fastq-tools

Small utilities for working with fastq sequence files.

tabtk

Toolkit for processing TAB-delimited format

spacemacs

Emacs advanced Kit focused on Evil: The best editor is neither Emacs nor Vim, it's Emacs *and* Vim!

gada

bioinfomatics

fry

Simple ruby version manager for fish

bioinformatics

Tools for bioinformatics

THetA

Tumor Heterogeneity Analysis (THetA) is an algorithm that estimates the tumor purity and clonal/subclonal copy number aberrations directly from high-throughput DNA sequencing data. Please note that the latest release is now called THetA2.

clojure

The Clojure programming language

dotemacs

emacs configuration for vim users

oh-my-emacs

Provide an awesome, out-of-box, literate dotemacs for both newbies and nerds.

sratoolkit

SRAToolkit has been REPLACED - see README

qinling

demo_app

first_app

sample_app

bioruby-samtools

Porting of samtools-ruby to BioRuby. Binder of samtools for ruby, on the top of FFI -from original project-

MOSAIK

reference-guided aligner for next-generation sequencing technologies