zcablii / PhD_Cancer_Research

PhD_Cancer_Research

Basic about CRPC:

https://www.thelancet.com/pdfs/journals/lancet/PIIS0140-6736(14)61947-4.pdf

Our researches in this field:

https://www.europeanurology.com/article/S0302-2838(21)00022-1/fulltext

https://pubmed.ncbi.nlm.nih.gov/30179225/

Two papers about single cell RNAseq applications:

https://www.nature.com/articles/s12276-020-0422-0

https://www.cell.com/molecular-therapy-family/oncolytics/fulltext/S2372-7705(21)00051-6

New 3GB mRNA datasets:

https://drive.google.com/drive/folders/1WOOtC56mPvUpAOgf8nt7q2bMX9J_VqPK?usp=sharing

TODO

Gene co-expressison network construction

Gene embedding (like word embedding)

Graph Nerual Networks (GNN) on Gene co-expressison network

Reduced dimensional clustering diagram: PCA,t-SNE,UMAP for cluster visualisation