zbmed-semtec

zbmed-semtec

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zbmed-semtec's repositories

m4ml

A data repository to save ML-related metadata crosswalks

License:NOASSERTIONStargazers:5Issues:2Issues:1

maSMPs

Metadata model for machine-actionable Software Management Plans

Language:Jupyter NotebookLicense:NOASSERTIONStargazers:2Issues:6Issues:11

BioHackOutcomes

BioHackathon project to define and follow up BioHackathon projects

Language:Jupyter NotebookLicense:Apache-2.0Stargazers:1Issues:7Issues:0

BioMedSem-IR-KD

A course on Biomedical Semantics, Information Retrieval and Knowledge Discovery

Language:HTMLLicense:NOASSERTIONStargazers:1Issues:2Issues:0

bioschemas-ghpages-markup-tutorial

A tutorial on how to add Bioschemas markup to GitHub pages

License:NOASSERTIONStargazers:1Issues:2Issues:0

mlentory-etl-pipeline

This repository aims at exploring APIs from different ML-related platforms so we can harvest and harmonize data from them

Language:Jupyter NotebookLicense:GPL-3.0Stargazers:1Issues:0Issues:0

bioschemas-github-markup-example

Repository hosting examples of markup added to GitHub pages, mainly used for tutorials

Language:Jupyter NotebookLicense:MITStargazers:0Issues:0Issues:0

dome-galaxy-training

Training materials about the DOME recommendations with a Galaxy tutorial as use case

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hybrid-pre-doc2vec-doc-relevance

Hybrid approach combining dictionary-based NER and doc2vec

Language:Jupyter NotebookLicense:GPL-3.0Stargazers:0Issues:0Issues:0

mowl-graph2doc2vec

A repository to explore the use of ontology-based graphs (generated with MOWL) as background knowledge for scientific publications.

Language:Jupyter NotebookLicense:GPL-3.0Stargazers:0Issues:0Issues:0

ontoclue

OntoClue - An ontology-based approach for finding and creating clusters useful for life sciences literature-based knowledge discovery

Language:RubyLicense:MITStargazers:0Issues:0Issues:0
Language:PythonLicense:GPL-3.0Stargazers:0Issues:1Issues:0

sample-smp-code-repo

Sample code repository to use as an example to extract metadata for ELIXIR SMPs

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somef-fork

Use of SOftware Metadata Extraction Framework (SOMEF) for the use case of Software Management Plans

Language:Jupyter NotebookLicense:MITStargazers:0Issues:0Issues:0

topic-categorization-system

Topic categorization on scientific papers to improve information retrieval in the biomedical domain.

Language:Jupyter NotebookLicense:GPL-3.0Stargazers:0Issues:0Issues:0

TREC-doc-2-doc-relevance

doc-2-doc relevance assessment on PMIDs used in the TREC 2005 Genomics track

Language:Jupyter NotebookLicense:MITStargazers:0Issues:7Issues:9

zbmed-semtec.github.io

GitHub pages for the Semantic Technologies team at ZB MED

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doc2vec-doc-relevance

An approach exploring and assessing literature-based doc-2-doc recommendations using a doc2vec and applying to TREC and RELISH datasets

Language:PythonLicense:GPL-3.0Stargazers:0Issues:0Issues:0

FAIRification-game-4RS-data

This repository is used to mock research software repositories (via folders) used in the "FAIRification game for Research Software".

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maSMPs-metadata-extraction

This repository supports metadata extraction aligned to the maSMP metadata schema

License:GPL-3.0Stargazers:0Issues:0Issues:0
Language:PythonLicense:GPL-3.0Stargazers:0Issues:0Issues:0

w3id.org

Website source code for w3id.org.

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Language:PythonLicense:GPL-3.0Stargazers:0Issues:0Issues:0

word2doc2vec-doc-relevance

An approach exploring and assessing literature-based doc-2-doc recommendations using word2vec combined with doc2vec, and applying it to TREC and RELISH datasets

Language:PythonLicense:GPL-3.0Stargazers:0Issues:0Issues:0