zanbi / SISTA16-cmsy

cmsy

The official CMSY method for data-limited stock assessment. Described in Froese, R., Demirel, N., Coro, G., Kleisner, K. M., & Winker, H. (2016). Estimating fisheries reference points from catch and resilience. Fish and Fisheries. http://onlinelibrary.wiley.com/doi/10.1111/faf.12190/full

Latest version: CMSY_2019_9f.R

Stock data example files to use: Stocks_Catch_EU_1.csv (stock-ID dataset), Stocks_ID_EU_8.csv (catch time series dataset)

User guide: CMSY_2019_9f_UserGuide.pdf

Version used in the paper: CMSY_O_7q.R

Stock data example files: O_Stocks_ID_18_Med.csv (stock-ID dataset), O_Stocks_Catch_15_Med.csv (catch time series dataset)

Previous versions:

CMSY_O_7q.R - code used for the paper

Stock data example files: O_Stocks_ID_18_Med.csv (stock-ID dataset), O_Stocks_Catch_15_Med.csv (catch time series dataset)

CMSY_2019_5.R - code used for stock assessment courses up to November 2019

Stock data example files: O_Stocks_Catch_15_Med.csv (stock-ID dataset), O_Stocks_ID_19_Med.csv (catch time series dataset)