yz22015's starred repositories
The-Art-of-Linear-Algebra
Graphic notes on Gilbert Strang's "Linear Algebra for Everyone"
spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
obsidian-consistent-attachments-and-links
Obsidian plugin. Move note with attachments.
openai_tools
Growing collection of scripts to summarize the scientific literature using large-language models like ChatGPT.
NeuroPyxels
NeuroPyxels (npyx) is a python library built for electrophysiologists using Neuropixels electrodes. This package stems from the need of a pythonist who really did not want to transition to MATLAB to work with Neuropixels: it features a suite of core utility functions for loading, processing and plotting Neuropixels data.
DeepCAD-RT
DeepCAD-RT: Real-time denoising of fluorescence time-lapse imaging using deep self-supervised learning
warpAnnotations
A tool to transform annotations (such as points, skeletons or meshes) between spatial datasets.
protocolBLAST
Sample preparation and warping accuracy for correlative multimodal imaging in the mouse olfactory bulb using two-photon, synchrotron X-ray and volume electron microscopy
XrayAssistedStaining
Code for analyzing the heavy metal accumulation during X-ray assisted staining