Yuyao Song's repositories
cross-species-cellgroup-comparison
Development project for comparing cell groupings between experiments across species
ggsignif
Easily add significance brackets to your ggplots
gh-pages-minima-starter
A minimal example for running Github Pages with the minima theme.
GNN_learning
Colab notebooks to learn GNN
pytorch_geometric
Graph Neural Network Library for PyTorch
SAMap
SAMap: Mapping single-cell RNA sequencing datasets from evolutionarily distant organisms.
samap-workflow
Simplified SAMap workflow
sccaf
Single-Cell Clustering Assessment Framework
scfindME_example
A temporary remote to store scfindME package example data and index
scib
Benchmarking analysis of data integration tools
selectBCM
An R wrapper to detect and correct batch-effects in gene-expression data (Microarray and bulk-RNAseq))
seurat
R toolkit for single cell genomics
UpSetR
An R implementation of the UpSet set visualization technique published by Lex, Gehlenborg, et al..