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Yu Lab at Virginia Tech (yu-lab-vt)

yu-lab-vt

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Company:Virginia Tech

Location:Arlington, VA

Home Page:https://ece.vt.edu/people/profile/yu

Twitter:@yu_guoqiang

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Yu Lab at Virginia Tech's starred repositories

CMC

A Conditional Multifactorial Contingency (CMC) model to jointly learn the multifactorial effect in large-scale data.

Language:C++Stargazers:4Issues:0Issues:0

PrinCut-Auto

an unsupervised automatic 3D cell detector and manual annotation assistant

Language:MATLABStargazers:5Issues:0Issues:0

AQuA

An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data

Language:MATLABStargazers:48Issues:0Issues:0

NIS3D

A Completely Annotated Benchmark for Dense 3D Nuclei Image Segmentation

Language:MATLABLicense:MITStargazers:5Issues:0Issues:0

ConvexVST

A Convex Optimization Approach to Variance-stabilizing Transformation

Language:MATLABLicense:GPL-3.0Stargazers:9Issues:0Issues:0

muSSP

An exact and efficient min-cost flow algorithm for data-association in multi-object tracking

Language:C++License:Apache-2.0Stargazers:110Issues:0Issues:0

GTW

Graphical Time Warping

Language:MATLABStargazers:3Issues:0Issues:0

FASP

Functional AStrocyte Phenotyping (FASP) is a Fiji plugin that automatically analyzes and characterizes the spatiotemporal functional status of astrocytes from time-lapse Ca2+ imaging data. FASP has been updated to analyze more complex data, especially in-vivo data. The new version is available upon request to Prof. Yu (yug@vt.edu).

Language:JavaStargazers:3Issues:0Issues:0

SynQuant

A Fiji plugin that automatically quantify synapses from multi-channel fluorescence microscopy images.

Language:JavaLicense:GPL-3.0Stargazers:14Issues:0Issues:0

BaxterAlgorithms

Software for segmentation, tracking and analysis of cells in microscope image sequences.

Language:MATLABLicense:MITStargazers:40Issues:0Issues:0

CINDA

Circulation Network based Data-association for Multi-object Tracking

Language:CStargazers:32Issues:0Issues:0

Multitarget-tracker

Multiple Object Tracker, Based on Hungarian algorithm + Kalman filter.

Language:C++License:Apache-2.0Stargazers:2156Issues:0Issues:0

KG_Instance_Segmentation

[MICCAI 2019] Multi-scale Cell Instance Segmentation with Keypoint Graph based Bounding Boxes

Language:PythonStargazers:83Issues:0Issues:0