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Yu Lab at Virginia Tech (yu-lab-vt)

yu-lab-vt

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Company:Virginia Tech

Location:Arlington, VA

Home Page:https://ece.vt.edu/people/profile/yu

Twitter:@yu_guoqiang

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Yu Lab at Virginia Tech's repositories

muSSP

An exact and efficient min-cost flow algorithm for data-association in multi-object tracking

Language:C++License:Apache-2.0Stargazers:110Issues:5Issues:11

AQuA

An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data

Language:MATLABStargazers:48Issues:9Issues:28

CINDA

Circulation Network based Data-association for Multi-object Tracking

Language:CStargazers:32Issues:6Issues:8

SynQuant

A Fiji plugin that automatically quantify synapses from multi-channel fluorescence microscopy images.

Language:JavaLicense:GPL-3.0Stargazers:14Issues:2Issues:4

ConvexVST

A Convex Optimization Approach to Variance-stabilizing Transformation

Language:MATLABLicense:GPL-3.0Stargazers:9Issues:1Issues:0

BILCO

BIdirectional pushing with Linear Component Operations, an efficient algorithm for solving joint alignment problem

Language:C++License:MITStargazers:6Issues:0Issues:0

NIS3D

A Completely Annotated Benchmark for Dense 3D Nuclei Image Segmentation

Language:MATLABLicense:MITStargazers:5Issues:1Issues:0

PrinCut-Auto

an unsupervised automatic 3D cell detector and manual annotation assistant

Language:MATLABStargazers:5Issues:1Issues:0

CMC

A Conditional Multifactorial Contingency (CMC) model to jointly learn the multifactorial effect in large-scale data.

Language:C++Stargazers:4Issues:2Issues:0

FASP

Functional AStrocyte Phenotyping (FASP) is a Fiji plugin that automatically analyzes and characterizes the spatiotemporal functional status of astrocytes from time-lapse Ca2+ imaging data. FASP has been updated to analyze more complex data, especially in-vivo data. The new version is available upon request to Prof. Yu (yug@vt.edu).

Language:JavaStargazers:3Issues:1Issues:0

GTW

Graphical Time Warping

Language:MATLABStargazers:3Issues:2Issues:0

Whole-VNC-Imaging-Analysis

A whole-VNC functional imaging data analysis framework

Language:MATLABStargazers:1Issues:2Issues:0

AQuA-Fiji

AQuA Fiji plugin

Language:JavaStargazers:0Issues:2Issues:2

AQuA2-Fiji

Fiji Implementation of AQuA2

Language:JavaLicense:GPL-3.0Stargazers:0Issues:1Issues:0

cpp-function-library

This repository is a library of frequently used cpp functions.

Stargazers:0Issues:2Issues:0

stardist

StarDist - Object Detection with Star-convex Shapes

Language:PythonLicense:BSD-3-ClauseStargazers:0Issues:0Issues:0

SynQuant-data

Data sets used in SynQuant paper

Language:MATLABStargazers:0Issues:0Issues:0