Beast code in Giters

Yan Shao's repositories

Antimicrobial Resistance Identification By Assembly

Language:PythonGPL-3.0010

:dragon: :fly: Assemble bacterial isolate genomes from Nanopore reads

Language:PerlGPL-3.0000

Team162 metagenome pipeline

GPL-3.0010

An integrated pipeline for estimating strain-level genomic variation from metagenomic data

Language:PythonGPL-3.0010

Using kmers to find plasmids

Language:PythonGPL-3.0010

Code of the Shiny Application for power and sample sizes for microbiome studies

Language:R010

Short Read Sequence Typing for Bacterial Pathogens

Language:PythonNOASSERTION010

StrainEst - abundance estimation of strains

Language:C++GPL-3.0010