youngwook-mri

Youngwook Kee's starred repositories

pypulseq

Pulseq in Python

Language:PythonAGPL-3.011300

Horos™ is a free, open source medical image viewer. The goal of the Horos Project is to develop a fully functional, 64-bit medical image viewer for OS X. Horos is based upon OsiriX and other open source medical imaging libraries. Horos is made freely available under the GNU Lesser General Public License, Version 3 (LGPL-3.0). Horos is linked against the Grok JPEG 2000 library, for fast viewing of JPEG 2000 images. This library is licensed under the terms of the GNU Affero General Public License.

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AZTEK

Computation of AZTEK trajectories for 3D radial UTE MR acquistions

Language:CMIT700

mrrt.nufft

Non-Uniform FFT on the CPU and GPU (1D, 2D and 3D)

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OptML_course

EPFL Course - Optimization for Machine Learning - CS-439

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QSM.m

MATLAB toolbox for Quantitative Susceptibility Mapping

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GIRF

Code package to calculate and use the gradient system impulse response function

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cvxpy

A Python-embedded modeling language for convex optimization problems.

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awesome-optimal-transport

A list of awesome papers and cool resources on optimal transport and its applications in general! As you will notice, this list is currently mostly focused on optimal transport for machine learning topics.

MIT19600

MRI-education-resources

Resources for learning the principles of magnetic resonance imaging (MRI)

Language:Jupyter NotebookMIT10100

POT

POT : Python Optimal Transport

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Radial-Field-of-Views

Radial sampling patterns in frequency space to support anisotropic field of views (FOVs) in the dual domain

Language:MATLABBSD-3-Clause1400

ukat

UKRIN Kidney Analysis Toolbox

Language:Jupyter NotebookGPL-3.01200

torchio

Medical imaging toolkit for deep learning

Language:PythonApache-2.0202300

active-mri-acquisition

Active Acquisition for fastMRI

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tensorly

TensorLy: Tensor Learning in Python.

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MRItrajectory

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MRIReco.jl

Julia Package for MRI Reconstruction

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numerical-linear-algebra

Solutions to exercises in Numerical Linear Algebra by Trefethen and Bau.

7300

OCTOPUS

Off-resonance Correction OPen soUrce Software

Language:PythonGPL-3.01500

reproducible-tensor-completion-state-of-the-art

11800

Spectral-Spatial-RF-Pulse-Design

This package includes Matlab functions to design spectral-spatial RF pulses (also known as spatial-spectral RF pulses) for application to magnetic resonance spectroscopy and imaging

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geotensor

Geometric low-rank tensor completion for color image inpainting.

Language:Jupyter NotebookMIT4100

Kalman-and-Bayesian-Filters-in-Python

Kalman Filter book using Jupyter Notebook. Focuses on building intuition and experience, not formal proofs. Includes Kalman filters,extended Kalman filters, unscented Kalman filters, particle filters, and more. All exercises include solutions.

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mri-recon

mri reconstruction toolbox

Language:MatlabGPL-3.01400

image-super-resolution

🔎 Super-scale your images and run experiments with Residual Dense and Adversarial Networks.

Language:PythonApache-2.0457600

ExploreASL

ExploreASL: releases can be found in the main branch or within the releases tab. If you want to contribute, please contact us at h.j.mutsaerts@amsterdamumc.nl. Development details can be found under the wiki tab. Code documentation can be found on the documentation website https://exploreasl.github.io/Documentation

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fastms

Real-Time Minimization of the Piecewise Smooth Mumford-Shah Functional

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makefiletutorial

Learn make by example

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