David Young's repositories
flightgear-mod
Random Collection of Mods for FlightGear Flight Simulator
python-bioformats
Read and write life sciences file formats
3DUnetCNN
Keras 3D U-Net Convolution Neural Network (CNN) designed for medical image segmentation
jsyntaxpanettx
JSyntaxPane used in the Text Trix editor
python-javabridge
Python wrapper for the Java Native Interface
bg-atlasapi
A lightweight python module to interact with atlases for systems neuroscience
bg-atlasgen
Scripts to package BrainGlobe atlases
boxcli
A command line interface for interacting with the Box API.
DeepLabCut
Markerless pose estimation of user-defined features with deep learning for all animals, including humans
F-22
FG Aircraft | F-22 from FGUK Hangar
F-35B
FG Aircraft | F-35B
ggforce
Accelerating ggplot2
matplotlib
matplotlib: plotting with Python
MRtree
MRtree R implementation
Optimized-RGB-To-ColorName
This API gives closest approximation of an RGB value to a set of color names. It is highly optimized for performance and scalability.
osterttx
Another syntax highlighter for Text Trix based on the Ostermiller Syntax package
pyinstaller
Freeze (package) Python programs into stand-alone executables
radio
RadIO is a library for data science research of computer tomography imaging
raisr
A Python implementation of RAISR
SCDC
SCDC
scikit-image
Image Processing SciKit (Toolbox for SciPy)
seurat
R toolkit for single cell genomics
SimpleElastix
Multi-lingual medical image registration library
SimpleITK
SimpleITK: a layer built on top of the Insight Toolkit (ITK), intended to simplify and facilitate ITK's use in rapid prototyping, education and interpreted languages.
Stereopy
A toolkit of spatial transcriptomic analysis.
ttx_cleanreturn
Plugin to remove extra newlines in the Text Trix editor
ttx_search
Search plugin for the Text Trix editor
ttx_songsheet
Song sheet chord transposer for the Text Trix editor