yoannpellen

jcvi

Python library to facilitate genome assembly, annotation, and comparative genomics

pagan-msa

Automatically exported from code.google.com/p/pagan-msa

RootingNotes

Notes on rooting from CoME2022

RERconverge

Analysis of convergence between organismal traits and DNA/protein sequences

GeneRax

fasta-phylip-partitions

Convert from fasta to phylip format and generate partitioned data if needed

raxml-ng

RAxML Next Generation: faster, easier-to-use and more flexible

prank-msa

Automatically exported from code.google.com/p/prank-msa

free-programming-books

:books: Freely available programming books

GAAS

Genome Assembly and Annotation Service code

Augustus

Genome annotation with AUGUSTUS

Python-for-Scientists

A list of recommended Python libraries, and resources, intended for scientific Python users.

awesome-python

An opinionated list of awesome Python frameworks, libraries, software and resources.

HAPpy-ABCENTH

A pipeline for homology based annotation utilizing exon structural conservation

annotation-scripts

cheatsheets

Official Matplotlib cheat sheets

awesome-for-beginners

A list of awesome beginners-friendly projects.

awesome

😎 Awesome lists about all kinds of interesting topics

bitacora

BITACORA: A Bioinformatics tool for gene family annotation