yhuang-thu's repositories
adjustText
A small library for automatically adjustment of text position in matplotlib plots to minimize overlaps.
atomsk
Atomsk: A Tool For Manipulating And Converting Atomic Data Files -
colorcet
A set of useful perceptually uniform colormaps for plotting scientific data
FFmpeg
Mirror of https://git.ffmpeg.org/ffmpeg.git
fftool
Tool to build force field input files for molecular simulation.
introtodeeplearning
Lab Materials for MIT 6.S191: Introduction to Deep Learning
lammps-input-files
LAMMPS inputs and data files
lammps-tools
与LAMMPS有关的数据处理软件
lammps-tutorials
LAMMPS tutorials for Beginners
lammps_vscode
VSCODE extension for syntax highlighting of LAMMPS scripts
mdtraj
An open library for the analysis of molecular dynamics trajectories
MLP_NeuroSim_V2.0
Benchmark framework of synaptic device technologies for a simple neural network
MNIST-Handwritten-Digit-Recognition-with-CNN-in-Python-using-Keras
This project implements and explains Python code to recognize handwritten digits (MNIST dataset) with a CNN using Keras.
ModelingNeuralCircuits
PDF and Code to accompany the textbook "Modeling Neural Circuits Made Simple"
moltemplate
A general cross-platform tool for preparing simulations of molecules and complex molecular assemblies
moviepy
Video editing with Python
obs-studio
OBS Studio - Free and open source software for live streaming and screen recording
ParticleTracking-Python
Python particle tracking code
polymer_metal_interface
Provides some useful information and the LAMMPS input files to model a polymer-metal interface.
pymatgen
Python Materials Genomics (pymatgen) is a robust materials analysis code that defines core object representations for structures and molecules with support for many electronic structure codes. It is currently the core analysis code powering the Materials Project.
Python
My Python Examples
reservoirpy
A simple and flexible code for Reservoir Computing architectures like Echo State Networks
sentence-collection
A collection of writing materials of English sentences
sympy
A computer algebra system written in pure Python
topotools
VMD plugin for manipulating topology information
TrackMate
TrackMate is your buddy for your everyday tracking.
trackpy
Python particle tracking toolkit
training-material
A collection of Galaxy-related training material
vipster
Visualization and editing of periodic molecular structure files.