yha / ElegansIndividuality

C. elegans individuality analysis

Home Page:https://doi.org/10.7554/eLife.84312

Geek Repo:Geek Repo

Github PK Tool:Github PK Tool

C. elegans individuality analysis

This repository contains data and code related to individuality analysis in

Reemy Ali Nasser, Yuval Harel, Shay Stern (2023). Early-life experience reorganizes neuromodulatory regulation of stage-specific behavioral responses and individuality dimensions during development (https://doi.org/10.7554/eLife.84312)

input data files

Input data includes

  • well-list.csv: list of individual worms/wells and their strain and stress condition (Days Starvation, DS)
  • roam-frac-10.csv: roaming fraction for each worm in each of 10 bins per development stage

generating output

Run julia ./run.jl in the project's home dir. Output is generated in the output directory.

Tested with julia 1.7.2.

About

C. elegans individuality analysis

https://doi.org/10.7554/eLife.84312

License:MIT License


Languages

Language:Julia 100.0%