yenon118

HAPPI_GWAS_2

The HAPPI_GWAS_2 is a pipeline built for genome-wide association study (GWAS).

VisualVariants

The goal of this project is to create a R package and executable scripts to visualize variants in Variant Call Format (VCF) files and Bcftools processed tab-delimited files.

2022_07_01_GSE176465

2022_07_01_GSE176465

AlleleCatalog

The AlleleCatalog pipeline is built for generating Allele Catalog datasets using next-generation sequencing (NGS) based genetic data and metadata.

2022_08_30_KPMP_Integrative_Analysis

AlleleCatalogTool

The Allele Catalog Tool is an Allele Catalog data visualization tool built using PHP, HTML, CSS, and JavaScript in Laravel Framework.

FactoryManager

This is a Java application which can record and organize data to help factory managers run their factories.

snakyVC

The snakyVC pipeline is designed for efficiently and parallelly executing variant calling on next-generation sequencing (NGS) whole-genome datasets.

SoybeanAlleleCatalogTool

The Soybean Allele Catalog Tool is a Allele Catalog data visualization tool built using PHP, HTML, CSS, and JavaScript.

SoybeanGenVarX

The Soybean Genomic Variations Explorer (Soybean GenVarX) is a toolset that consists of promoter region component and CNV component for users to perform queries, visualize data, and conduct annotations using genotypic and phenotypic differences.

SoybeanMADisTool

The Soybean MADis Tool is a mutative allele discovery tool composed of mutative allele position combinative calculations and Allele Catalog visualization built using PHP, HTML, CSS, and JavaScript.

fastStructure

A variational framework for inferring population structure from SNP genotype data.

GenVarX

The Genomic Variations Explorer (GenVarX) is a toolset that consists of promoter region component and CNV component for users to perform queries, visualize data, and conduct annotations using genotypic and phenotypic differences.

GenVarX_Data_Processing

This repository contains data processing scripts that were written and ran to generate CNV data using cn.MOPS and sequence logo figures using Ceqlogo in MEME suite.

Java_Assignments

(Fall 2017) [CMP_SC 3330 Object Oriented Programming]

MViz

MViz: A Toolset for Annotating Promoter and CNV Regions Using Genotypic and Phenotypic Differences

RideXpress

RideXpress is an Automated Car Rental System (ARCS) platform. This project is provided by Revature Coding Bootcamp for students who are interested in a web development career.

SoybeanAccessionViewer

The Soybean Accession Viewer is a tool to provide visualization of soybean accessions related data.

SoybeanMViz

SoybeanMViz: A Toolset for Annotating Promoter and CNV Regions Using Genotypic and Phenotypic Differences

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