Beast code in Giters

Yen Low's repositories

twitterpandemicindex

Pandemic index calculated from 200M coronavirus tweets. Submission for 2020 Lumiata COVID-19 hackathon https://devpost.com/software/tweet-pandemic-index

Language:Python5 30

retain-keras

Reimplementation of RETAIN Recurrent Neural Network in Keras

Language:PythonApache-2.0200

chemBioViz

Data integration and visualization tool taking in chemical structures and bioassays for chemical risk assessment (CBRA) for publication

Language:R100

confounderControl

Code for paper on automating propensity scores. Comparing high-dimensional confounder control methods for rapid cohort studies from electronic health records

Language:R100

mysql

Re-usable MySQL functions for phenotyping and generating patient cohorts

100

nCoV2019

COVID-19 line list realtime download, processing and analysis

Language:Jupyter Notebook1 10

utils

Frequently used utility functions (for APIs/PhD/postdoc chem/clinical informatics)

Language:R100

CCDC

Algorithm developed for Continuous Change Detection and Classification (CCDC) of land cover using all available Landsat data.

Language:MATLABMIT000

census

A Python wrapper for the US Census API

Language:PythonBSD-3-Clause000

Clinical-Trial-Parser

Library for converting clinical trial eligibility criteria to a machine-readable format.

Language:GoApache-2.0000

CohortMethod

[Under development] An R package for performing new-user cohort studies in an observational database in the OMOP Common Data Model.

Language:RApache-2.0010

contoso-chat

RAG promptflow workshop

Language:Jupyter NotebookMIT000

coronaprep

Dynamic topic modeling of tweets on coronavirus preparation

Language:Python000

coursera_dl

programming assignments as part of Coursera Deeplearning.ai

Language:Jupyter NotebookMIT000

Cyclops

[Under development] Cyclops (Cyclic coordinate descent for logistic, Poisson and survival analysis) is an R package for performing large scale regularized regressions.

Language:C++000

eat

Language:Python030

emailNetwork

visualize the email exchanges among the senior management staff of enron

Language:Python000

fastai

The fastai deep learning library, plus lessons and and tutorials

Language:Jupyter NotebookApache-2.0000

harvesting-tools

A collection of code snippets designed to be dropped into the data harvesting process directly after generating the zip starter kit

Language:PythonGPL-3.0000

howsmybaby

Summarize, instead of reading all forum pages of moms with babies born in the same month as yours

Language:Jupyter Notebook000

KnowledgeBase

Source code used to develop the OHDSI knowledge base of sources with information relevant for assessing assocations between drugs and health outcomes of interest.

Language:Python010