Yushi Yang (yangyushi)

yangyushi

Geek Repo

Company:@royallgroup

Location:Shenzhen

Home Page:yangyushi.github.io

Twitter:@yushiyang1992

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Yushi Yang's repositories

FishPy

Python Scripts for processing fish videos

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explore_lif

load an image from lif file as a numpy array

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FishSim

Simulating collective behaviour of fish

tcclib

Python wrapper for Topological Cluster Classification

nplocate

locate nano particles in 3D volumetric confocal images

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phd-thesis-yy-bristol-2022

Yushi Yang PhD Thesis 2022 University of Bristol

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segview

visualising segmentation result

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BoidsFun

Boids model simulation for fun

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draw_spheres_3d

Draw binary sphere in a 3D image

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TCC

The Topological Cluster Classification algorithm

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yaggie

package used in THETA project in BCFN

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excel-data-plotter

Developed with the help of chatGPT. Prompt history included in the commits.

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hsmc

Hard Sphere Monte Carlo Simulation

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brcs

biased random colours

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bulb_control

controlling TP-Link smart bulb (Kasa) for scientific reasons

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colloids

Python and C++ library to process both experimental and simulation data of colloidal particles.

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Coursera_Capstone

To submit the assignments for the data science course on Coursera

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expdyn

dynamical analysis for experimental trajectories

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ezdata

handy gui app to process experimental data

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first-contributions

🚀✨ Help beginners to contribute to open source projects

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FishPy-Benchmark

Benchmarking the 3D Tracking Accuracy of FishPy package. Also serves as a demonstration.

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ising-mc

simulation just for fun!

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learn-tiff

Learning to work with lib tiff

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peri

Parameter Extraction from Reconstructing Images

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projective_correct

example code to correct the projective in the image

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zefiia

zebrafish image analysis

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