Venn Diagram by ggplot2, with really easy-to-use API. This package is inspired by Venny
if (!require(devtools)) install.packages("devtools")
devtools::install_github("yanlinlin82/ggvenn")
This package supports both list
and data.frame
type data as input.
For list
data (each element is a set):
library(ggvenn)
a <- list(`Set 1` = c(1, 3, 5, 7, 9),
`Set 2` = c(1, 5, 9, 13),
`Set 3` = c(1, 2, 8, 9),
`Set 4` = c(6, 7, 10, 12))
ggvenn(a, c("Set 1", "Set 2")) # draw two-set venn
ggvenn(a, c("Set 1", "Set 2", "Set 3")) # draw three-set venn
ggvenn(a) # without set names, the first 4 elements in list will be chose to draw four-set venn
For data.frame
data (each logical column is a set):
d <- tibble(value = c(1, 2, 3, 5, 6, 7, 8, 9, 10, 12, 13),
`Set 1` = c(T, F, T, T, F, T, F, T, F, F, F),
`Set 2` = c(T, F, F, T, F, F, F, T, F, F, T),
`Set 3` = c(T, T, F, F, F, F, T, T, F, F, F),
`Set 4` = c(F, F, F, F, T, T, F, F, T, T, F))
ggvenn(d, c("Set 1", "Set 2")) # draw two-set venn
ggvenn(d, c("Set 1", "Set 2", "Set 3")) # draw three-set venn
ggvenn(d) # without set names, the first 4 logical column in data.frame will be chose to draw four-set venn
For data.frame
data, there is also another way to plot in ggplot grammar:
# draw two-set venn (use A, B in aes)
ggplot(d, aes(A = `Set 1`, B = `Set 2`)) +
geom_venn() + theme_void() + coord_fixed()
# draw three-set venn (use A, B, C in aes)
ggplot(d, aes(A = `Set 1`, B = `Set 2`, C = `Set 3`)) +
geom_venn() + theme_void() + coord_fixed()
# draw four-set venn (use A, B, C, D in aes)
ggplot(d, aes(A = `Set 1`, B = `Set 2`, C = `Set 3`, D = `Set 4`)) +
geom_venn() + theme_void() + coord_fixed()
There are more options for customizing the venn diagram.
-
Tune the color and size
For filling:
fill_color
- default is c("blue", "yellow", "green", "red")fill_alpha
- default is 0.5
For stroke:
stroke_color
- default is "black"stroke_alpha
- default is 1stroke_size
- default is 1stroke_linetype
- default is "solid"
For set name:
set_name_color
- default is "black"set_name_size
- default is 6
For text:
text_color
- default is "black"text_size
- default is 4
All parameters above could be used in both
ggvenn()
andgeom_venn()
.For example:
a <- list(A = 1:4, B = c(1,3,5)) ggvenn(a, stroke_linetype = 2, stroke_size = 0.5, set_name_color = "red", set_name_size = 15, fill_color = c("pink", "gold"))
-
Show elements
show_elements
- default is FALSElabel_sep
- text used to concatenate elements, default is ","
For example:
a <- list(A = c("apple", "pear", "peach"), B = c("apple", "lemon")) ggvenn(a, show_elements = TRUE) ggvenn(a, show_elements = TRUE, label_sep = "\n") # show elements in line
-
Hide percentage
show_percentage
- default is TRUE
For example:
a <- list(A = 1:5, B = 1:2) ggvenn(a, show_percentage = FALSE)
-
Change digits of percentage
digits
- default is 1
For example:
a <- list(A = 1:5, B = 1:2) ggvenn(a, digits = 2)