Beast code in Giters

xzhuo's repositories

indel_epi_landscape

pipeline and script for human-chimp sv affecting cis regulatory elements

Language:Python2 10

maf_merger

merge maf alignment blocks

Language:PythonMIT1 10

biopython

Official git repository for Biopython (converted from CVS)

Language:PythonNOASSERTION010

blog

Language:Ruby000

ccsmeth

Detecting DNA methylation from PacBio CCS reads

Language:PythonGPL-3.0000

ccsMethDocker

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comparative-browser-landing-page

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CpGrate

CpG/nonCpG rate calculation

Language:Perl010

cuhk

MIT000

DSS

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eg-docs

WashU Epigenome Browser Documentation

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jasminesnake

snakemake pipeline for jasmine methylation

Language:PythonMIT000

METEORE

Language:Dockerfile000

metheor

:comet: Ultrafast DNA methylation heterogeneity calculation from bisulfite alignments

Language:RustGPL-3.0000

methylation

methylation caller dockerfile

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methylationGGpairs

methylation benchmarking ggpairs snakemake pipiline

Language:RMIT000

modbamUtil

Language:Python000

pacbio

Language:PerlMIT000

pacbiobam

docker files of samtools=1.11 and pbbam=1.6

Language:DockerfileMIT010

personal

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Porechop

adapter trimmer for Oxford Nanopore reads

Language:C++GPL-3.0000

primroseWdl

Language:wdlMIT010

sars-like-cov

This is a one-off Nextstrain build for SARS-like coronaviruses

Language:Python000

submissionUI

Public portal for submission UI, please see docs at http://submissionui.readthedocs.io/

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target_validation

validate TaRGET metadata

MIT000

TargetBulkUpload

Bulk upload data to target dcc

Language:PythonMIT050

utility

Language:Python000

wang-sever-slackbot

Wang Lab Slack bot for server info

Language:JavaScript000

wgbs

snake file of wgbs pipeline

Language:PythonMIT010

xzhuo.github.io

my website

Language:HTMLMIT000