CANAlization: Control & Redundancy in Boolean Networks
This package implements a series of methods used to study control, canalization and redundancy in Boolean Networks.
Installation:
This package (will be) available in Pypi. Just run the following command on terminal to install.
$ pip install cana
You can also source the code directly from the github project page.
Docs:
The full documentation can be found at: rionbr.github.io/CANA
Papers:
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R.B. Correia, A.J. Gates, X. Wang, L.M. Rocha [2018]. "CANA: A python package for quantifying control and canalization in Boolean Networks". Frontiers in Physiology. 9: 1046. doi: 10.3389/fphys.2018.01046
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A. Gates and L.M. Rocha. [2016] "Control of complex networks requires both structure and dynamics." Scientific Reports 6, 24456. doi: 10.1038/srep24456.
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A. Gates and L.M. Rocha [2014]. "Structure and dynamics affect the controllability of complex systems: a Preliminary Study". Artificial Life 14: Proceedings of the Fourteenth International Conference on the Synthesis and Simulation of Living Systems: 429-430, MIT Press.
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M. Marques-Pita and L.M. Rocha [2013]. "Canalization and control in automata networks: body segmentation in Drosophila Melanogaster". PLoS ONE, 8(3): e55946. doi:10.1371/journal.pone.0055946.