xptree

DeepInf

DeepInf: Social Influence Prediction with Deep Learning

NetMF

Network Embedding as Matrix Factorization: Unifying DeepWalk, LINE, PTE, and node2vec

NetSMF

NetSMF: Large-Scale Network Embedding as Sparse Matrix Factorization

LightNE

BlockBERT

Blockwise Self-Attention for Long Document Understanding

Co-occurrence-Concentration

NeurIPS 2020: A Matrix Chernoff Bound for Markov Chains and its Application to Co-occurrence Matrices

alphafold

Open source code for AlphaFold.

3T

Tiered Tensor Transform (3T) multi-scale protein-ligand complex pocket structure generation & drug screening

analyst

BioNEV

Graph Embedding Evaluation / Code and Datasets for "Graph Embedding on Biomedical Networks: Methods, Applications, and Evaluations"

Conf

Various config files.

coref

BERT for Coreference Resolution

deepbehavior_code

Code for deepbehavior project

dgl

Python package built to ease deep learning on graph, on top of existing DL frameworks.

fairseq

Facebook AI Research Sequence-to-Sequence Toolkit written in Python.

fastmoe

A fast MoE impl for PyTorch

graph-kernels

Graph kernels

grouppp

Group Data Mining

HypergraphEmbedding

MdrDB

Megatron-LM

Ongoing research training transformer models at scale

nmp_qc

Neural Message Passing for Computer Vision

OpenNMT-py

Open Source Neural Machine Translation in PyTorch

powerful-gnns

How Powerful are Graph Neural Networks?

ProteinLM

Protein Language Model

Semi-supervised-VAE

tensorcircuit

Tensor network based quantum circuit simulator for the NISQ era

transformers

🤗 Transformers: State-of-the-art Natural Language Processing for TensorFlow 2.0 and PyTorch.

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