xiyuyi

SOFI2.0

this package is associated with our manuscript "Moments reconstruction and local dynamic range compression of high order Super-resolution Optical Fluctuation Imaging"

SR_simu3D

This is a simulation package designed to create realistic simulations for the study of super-resolution of fluorescence microscopy.

aydin

Aydin — User-friendly, Fast, Self-Supervised and Unsupervised Image Denoising for All.

binder-framework

A sample repo on deploying to Binder

coPylot

coPylot - microscope control

cryoSOFI

llsmvis

data analysis codes for the lattice light sheet microscopy (LLSM) datasets acquired at the LLSM at LLNL.

PyPRIS

This is a python package to perform progressive refinement method for sparse recovery (PRIS)

pysofi

PySOFI is a Python package for SOFI analysis.

RealisticSimulator_3D

daxi

High-Resolution, Large Field-of-View, and Multi-ViewSingle Objective Light-Sheet Microscopy

daxi-controller

python controller codes for daxi microscope

FRETBursts

Burst analysis software for single and multi-spot single-molecule FRET (smFRET) data.

FRETBursts_notebooks

Tutorials and usage examples for FRETBursts software

napari

napari: a fast, interactive, multi-dimensional image viewer for python

napari-training-course

Lectures for a napari training course

OpenVisus

Open Source distribution of the ViSUS capabilities

phconvert

Convert Beker&Hickl, PicoQuant and other formats to Photon-HDF5

SOFI

Data analysis package for super-resolution of optical fluctuation imaging

TasteFusion

xy_fInterp_forTIFF

This code performs Fourier interpolation of each frame from the input TIFF stack