Xiaoming Fu's repositories
DelaySSAToolkit.jl
DelaySSAToolkit.jl: a tool in Julia for stochastic simulation with delays
RNAInferenceTool.jl
A Julia code repo for the RNA inference paper
LinearNoiseApproximation.jl
This package provides a numerical method of applying linear noise approximation (LNA) to a given reaction system
ApproxBayes.jl
Approximate Bayesian Computation (ABC) algorithms for likelihood free inference in julia
Bijectors.jl
Implementation of normalising flows and constrained random variable transformations
BlackBoxOptim.jl
Black-box optimization for Julia
DiffEqFlux.jl
Universal neural differential equations with O(1) backprop, GPUs, and stiff+non-stiff DE solvers, demonstrating scientific machine learning (SciML) and physics-informed machine learning methods
DiffEqJump.jl
Build and simulate jump equations like Gillespie simulations and jump diffusions with constant and state-dependent rates and mix with differential equations and scientific machine learning (SciML)
DiffEqSensitivity.jl
A component of the DiffEq ecosystem for enabling sensitivity analysis for scientific machine learning (SciML). Optimize-then-discretize, discretize-then-optimize, and more for ODEs, SDEs, DDEs, DAEs, etc.
dynare
This project has moved to https://git.dynare.org/Dynare/dynare
FiniteStateProjection.jl
Finite State Projection algorithms for chemical reaction networks
InvertibleNetworks.jl
A Julia framework for invertible neural networks
JuliaTemplate
Template from DrWatson
LeetCode.jl
A community driven project to provide solutions for LeetCode problems in the Julia programming language.
Lux.jl
Explicitly Parameterized Neural Networks in Julia
MomentClosure.jl
Moment closure package
NeuralOperators.jl
learning the solution operator for partial differential equations in pure Julia.
NumCME.jl
Direct solution of the Chemical Master Equation in Julia.
Optimization.jl
Local, global, and beyond optimization for scientific machine learning (SciML)
splatter-paper
Data and analysis for the Splatter paper
SurveyofPDEPackages
Survey of the packages of the Julia ecosystem for solving partial differential equations
test_webpage
✨ Build a beautiful and simple website in literally minutes. Demo at https://beautifuljekyll.com
Turing-Workshop
Workshop of Bayesian Statistics using Julia and Turing
Turing.jl
Bayesian inference with probabilistic programming.
xiaomingfu2013
Config files for my GitHub profile.