xiangyupan

deepTools

Tools to process and analyze deep sequencing data.

rgi

Resistance Gene Identifier (RGI). Software to predict resistomes from protein or nucleotide data, including metagenomics data, based on homology and SNP models.

MECAT

MECAT: an ultra-fast mapping, error correction and de novo assembly tool for single-molecule sequencing reads

idr

IDR

Zhang2018SCLS

Rice (Oryza Sative) root microbiome time-course analysis. (Zhang2018SCLS)

notes-python

中文 Python 笔记

CNVcaller

CONCOCT

Clustering cONtigs with COverage and ComposiTion

NGS-pipeline

By study this, it won't be costly or time-consuming to customize a NGS data analysis pipeline

genome_analysis

ML-and-DM-in-action

Share my code during learning machine learning and data mining

SOAPdenovo2

Next generation sequencing reads de novo assembler.

megahit

Ultra-fast and memory-efficient (meta-)genome assembler

CNVcaller

2

利用requests和lxml爬取妹子图片网

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scripts

diamond

Accelerated BLAST compatible local sequence aligner.

lastz

Program for aligning DNA sequences, a pairwise aligner.

MACS

MACS -- Model-based Analysis of ChIP-Seq

assemble_pipeline

Assemble and following pipeline used in wisent genome paper.