xchromosome's repositories
awesome-machine-learning
A curated list of awesome Machine Learning frameworks, libraries and software.
bam-readcount
convert bam-readcount to VAF
bookdown-demo
A minimal book example using bookdown
CovGen
Creates a target specific exome_full192.coverage.txt file required by MutSig
cpsr
Cancer Predisposition Sequencing Reporter (CPSR) - prioritization of cancer germline variants
hap.py
Haplotype VCF comparison tools
NGI-RNAfusion
RNA pipeline for fusion detection
ngs-filters
Filters for false-positive mutation calls in NGS
NGS-pipe
NGS-pipe: next-generation sequencing pipelines for precision oncology
PubMed
PubMed datamining in R
rnaseq_tutorial
Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file formats, reference genomes, gene annotation, expression, differential expression, alternative splicing, data visualization, and interpretation.
SingleR
SingleR: Single-cell RNA-seq cell types Recognition
yufree.cn
yufree's personal website