wvdtoorn's repositories
slurm-job-tunnel
A utility to submit a SLURM job with specified resources and establish an SSH tunnel to the allocated compute node.
wf-cichlid
Nextflow workflow template repository
dmMIMESim
A tool for simulating the double-mutagenesis Mutational Interference Mapping Experiment
draco
Deconvolution of RNA Alternative COnformations
cmp_benchmarks
Wrapper around google/benchmark/tools/compare.py
nanoRMS
Prediction of RNA modifications and their stoichiometry from per-read features: current intensity, dwell time and trace (Begik*, Lucas* et al., BioRxiv 2021)
seqan3
The modern C++ library for sequence analysis. Contains version 3 of the library and API docs.
CovidStrategyCalculator
A standalone software to assess testing- and quarantine strategies for incoming travelers, contact person management and de-isolation
rdkit
The official sources for the RDKit library
mdanalysis
MDAnalysis is a Python library to analyze molecular dynamics trajectories.