Will (Wei) Yang's repositories
BKNN
What the Package Does (One Line, Title Case)
Neovim-from-scratch
📚 A Neovim config designed from scratch to be understandable
autocomplete
IDE-style autocomplete for your existing terminal & shell
syuzhet
An R package for the extraction of sentiment and sentiment-based plot arcs from text
alacritty
A cross-platform, GPU-accelerated terminal emulator
lenovo-m90n-hackintosh
Hackintosh for Lenovo ThinkCentre M90n-1
notes
hackmd notes
lenovo-thinkcentre-m93p-hackintosh
Mixed configurations and tools for Lenovo M93P Hackintosh
batchelor
Clone of the Bioconductor repository for the batchelor package.
Rphenograph
Rphenograph: R implementation of the PhenoGraph algorithm
bidifac
Bidimensional matrix factorization
single-cell-rna-seq
A single cell RNA-seq workflow following http://dx.doi.org/10.12688/f1000research.9501.2
atac-seq-pipeline
ENCODE ATAC-seq pipeline
awesome-single-cell
List of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.
dropSeqPipe
A SingleCell RNASeq pre-processing snakemake workflow
fastqtl
Enhanced version of the FastQTL QTL mapper
XGR
An R package to increase interpretability of genes and SNPs (eg identified from GWAS and eQTL mapping)
fastqtl-1
Fork of FastQTL for SVs
pycifa
Python implementation of Common and Individual Feature Extraction (CIFA)
varscan_accessories
accessory scripts for processing varscan somatic/copynumber outputs.
r_jive
Implementation of AJIVE in R
getting-started-with-genomics-tools-and-resources
Unix, R and python tools for genomics
RNA-seq-analysis
RNAseq analysis notes from Tommy Tang
DNA-methylation-analysis
my notes on DNA methylation analysis (arrays and sequencing data)
DNA-seq-analysis
my notes on structural variants analysis by lumpy