wsheffel / Synthea-Medgraph

Getting Started

This is a graph based on Synthea, a synthetic healthcare data generator. To get started, please review the prerequisites, installation for TG Cloud (if needed), and the Synthea Graph installation instructions.

NOTE: For Docker Instructions

Prerequisites

• git
• gradle
• TigerGraph Environment

Installation for TG Cloud

1. Go to TGCloud.io
2. Create an account or login
3. Navigate to My Solutions
4. Click Create Solution (top right)
5. Choose blank graph and complete provisioning

Synthea Graph Installation Instructions

1. Navigate to your project folder (where you want the project to reside)
2. Run git clone https://github.com/TigerGraph-OSS/Synthea-Medgraph.git
3. cd Synthea-medgraph
4. Update the gradle.properties file with your TigerGraph server information
5. Run gradle tasks (You should see Build Successful)
6. Type openssl s_client -connect hostname.i.tgcloud.io:14240 < /dev/null 2> /dev/null | openssl x509 -text > cert.txt, replacing "hostname" with the name of your TG cloud server
7. Navigate to the gradle folder in your home directory (cd ~/.gradle), then create a gradle.properties file (touch gradle.properties).
8. Open the gradle.properties file just created in the home directory. On the first line, write gpr.user = github_username, replacing github_username with your GitHub username. On the second line, write gpr.key = github_token, replacing github_token with a personal token on GitHub. To generate this token, go to github.com, navigate to your settings, select "Developer Settings," click "Personal access tokens," then press the button "Generate new token." Check off the option "read:packages" and generate the token. Copy the token and paste it replacing github_token. Finally, save the gradle.properties file and navigate back to the Synthea directory (cd -).
9. Run gradle createSchema
10. Go to your TigerGraph solution, and under Admin -> User Management click Create Secret
11. Add the secret to the gradle.properties file
12. Next run gradle allCreateLoad
13. Finally run gradle allLoad

Docker

Please refer to dockerized-synthetic-healthcare-graph for full walk-through.

Contributors

• Demo developed by Akash Kaul
• Docker developed by Bruno Simic
• Maintained by Jon Herke