wrshoemaker

PopGen

Repo of population genetic models and other evolutionary/ eco-evolutionary models and code

Bacillus_Evol_Timeseries

Bacillus_Growth

A repo containing code for analyzing growth rates in starved microbial populations

BacillusBarcodes

Code for analyzing bacillus barcode competition assays

BIG_2021_microbiome_evolution

coevo-seedbank-seq

sequencing data analysis

CompPopGenMicrobiomeReview

Dormancy_EAD

EcoEvoMet

Evol_16S

simulation of 16s evolution

experimental_macroecology

GenomeDorm

A repository of code and data for detecting molecular genetic signatures of dormancy in microbial genomes.

LTDE

macroeco_phylo

microbiome_evolution

Scripts for analyzing evolutionary dynamics in large cohorts of human gut metagenomes

MinimalCell

We study the evolution of synthetic organisms.

MutationDorm

Repository for simulating the role of dormancy in preventing the accumulation of deleterious mutations under stress

NetworkEvolution

NonSynLD

ParEvol

Phylo_Evol_Timeseries

PopGenVisuals

A repo containing Python code and Jupyter notebooks for the visualization of population genetic and evolutionary processes

rec-genome-tools

slim_recipes

Playing around with SLiM

snv_prevalence

SporeCosts

Final repository for the spore cost project.

StrainPrevalence

Task2

Code, documents, and data sets related to MURI2 Task 2.

Task2_Traits

wrshoemaker.github.io

Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes