Stanford wormsenseLab's repositories
Matlab-PatchMaster
Matlab functions for importing and dealing with Patchmaster data for electrophysiology.
AnalysisFunction
Analysis Function provides scripts to analyze electrophysiological data recorded with the HEKA system: the FALCON patch clamp system which combines the application of mechanical stimuli with self-sensing cantilever (Patchmaster_Falcon) and the two electrode voltage clamp system (Patchmaster_TEVC).
JupyterNotebooksDEGENaCPharm
Jupyter notebookes to create figures for the data for the functional and pharmacological characterization of DEG/ENaC/ASIC channels in Xenopus oocytes
Neurite_fluorescence_analysis
Comprehensive script for measuring fluorescence intensity in diffuse and punctate pools, inter-punctum intervals (IPI), puncta colocalization, intensity correlation quotient (ICQ) in neurites.
whole_genome_sequencing
scripts for analyzing whole-genome sequencing used to determine the molecular defect in him-4 mutants. linked to published paper (Nekimken et al, 2020, doi: 10.1091/mbc.E20-01-0049)