Workflow4Metabolomics (workflow4metabolomics)

Workflow4Metabolomics

workflow4metabolomics

Geek Repo

The collaborative portal dedicated to metabolomics data processing, analysis and annotation.

Location:France

Home Page:http://workflow4metabolomics.org/

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Workflow4Metabolomics's repositories

tools-metabolomics

Galaxy tools for metabolomics maintained by Workflow4Metabolomics

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workflow4metabolomics

Workflow4Metabolomics meta repository

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correlation_analysis

🚫 move to https://github.com/workflow4metabolomics/tools-metabolomics

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mixmodel4repeated_measures

🚫 move to https://github.com/workflow4metabolomics/tools-metabolomics

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nmr_annotation2d

🚫 move to https://github.com/workflow4metabolomics/tools-metabolomics

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anova

Anova for Galaxy

batch_correction

Correction for signal drift and batch effects

ipo.archive

:no_entry_sign: move to https://github.com/workflow4metabolomics/tools-metabolomics

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metaMS

Processing GC-MS data with metaMS in Galaxy

w4m-vm

Virtual machine for Workflow4Metabolomics Galaxy platform.

easyrlibrary-lib

Useful functions to make R script coding easier.

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gxit-nmrpro

1D and 2D NMR viewer integrated as a GXIT in Galaxy

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gxit-shiny-heatmap

Galaxy Interactive Environment to display heatmap.

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galaxy

Data intensive science for everyone.

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gxit-rstudio-metabolomics

Galaxy Interactive tool with rstudio

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iwc

Galaxy Workflows maintained by the Intergalactic Workflow Commission

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msPurity

Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics

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mspurity-galaxy

Galaxy tools for msPurity package: includes precursor ion purity calculations and spectral matching

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qualitymetrics

Metrics and graphics to check the quality of the data

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tool-bank-hmdb

HMDB MS search search by masses on HMDB online bank

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tool-generic_filter

This tool allows to remove all samples and/or variables corresponding to specific values regarding designated factors or numerical variables, in datasets corresponding to dataMatrix, sampleMetadata and variableMetadata.

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tool-table_merge

This tool allows to merge the data matrix with one metadata table.

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training-material

A collection of Galaxy-related training material

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w4m-config

This repository contains the W4M tool list

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W4MRUtils

Set of utilitqry functions to help W4M to create tools and their wrappers

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Workflow4Experimenters

Annual W4M training sessions

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